MirGeneDB 3.0
MirGeneDB ID

Sro-Mir-9-P36

Family name MIR-9 (all species)
Seed AAAGCUA
Species Roscoff worm (Symsagittifera roscoffensis)
MiRBase ID
Paralogues Sro-Mir-9-P35a  Sro-Mir-9-P35b 
Orthologues Agr-Mir-9  Bfl-Mir-9  Bko-Mir-9  Bla-Mir-9  Bpl-Mir-9  Cin-Mir-9  Cte-Mir-9  Dgr-Mir-9  Eba-Mir-9  Egr-Mir-9  Esc-Mir-9  Gsa-Mir-9  Gsp-Mir-9  Hmi-Mir-9  Hru-Mir-9  Isc-Mir-9  Lan-Mir-9  Lgi-Mir-9  Llo-Mir-9  Mom-Mir-9  Npo-Mir-9  Obi-Mir-9  Ofu-Mir-9  Ovu-Mir-9  Pau-Mir-9  Pdu-Mir-9  Pmi-Mir-9  Pve-Mir-9  Rph-Mir-9  Sma-Mir-9  Snu-Mir-9  Spu-Mir-9  War-Mir-9  Xbo-Mir-9 
Node of Origin (locus) S. roscoffensis
Node of Origin (family) Bilateria
Genome context
(GCA_025153585.1_SymRos_1_5_genomic)		 JANVAR010000606.1: 626870-626929 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGCGCUCUAAAAUUUGAGACCUUUUGCUAACCUUUGGUUUUUUCAGCUUAUGUCAGAUUCACAUGAACAAAAGCUAAAAAACCAAAGAUAAACAAGGUCUCACGAAACUAACGCCGCCCA
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Structure
        10            20        30        40        50          
GGCGCUCUAAAAUUUGA----|     UUGCUAAC            C     A   CAGAUU 
                     GACCUU        CUUUGGUUUUUU AGCUU UGU      \
                     CUGGAA        GAAACCAAAAAA UCGAA ACA      C
ACCCGCCGCAAUCAAAGCACU^     CAAAUA--            -     A   AGUACA 
.       110       100        90          80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Po
Star sequence

Sro-Mir-9-P36_5p*
mirBase accessionNone
Sequence 
0- CCUUUGGUUUUUUCAGCUUAUGU -23
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Mature sequence

Sro-Mir-9-P36_3p
mirBase accessionNone
Sequence 
38- AAAAGCUAAAAAACCAAAGAUA -60
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