MirGeneDB 3.0

MirGeneDB ID

Tur-Novel-1

Family name TUR-NOVEL-1 (all species)
Seed CGGAUUG
Species Two-spotted spider mite (Tetranychus urticae)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) T. urticae
Node of Origin (family) T. urticae
Genome context
(GCA_000239435.1_ASM23943v1_genomic_TUR_traces)
HE587302.1: 6079671-6079731 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GAUAUUAGAUGUGAUCAAAGCUUCUCAGCCUGAGUAAGAUGAUGAUUCGUUGAUGAUUAUUUAAUGGCUUCGGAUUGUCAUCUGAUUUGGGAUAAAGGCUUCACUUACUGAUAAUAAAUUC
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Structure
        10           20        30        40        50          
GAUAUUAGAUGUGAUCA---|     CUCAG  UG   A      UG     UUGAUGAUUA 
                    AAGCUU     CC  AGU AGAUGA  AUUCG          \
                    UUCGGA     GG  UUA UCUACU  UAGGC          U
CUUAAAUAAUAGUCAUUCAC^     AAUA-  GU   G      GU     UUCGGUAAUU 
 .       110       100         90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
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Star sequence

Tur-Novel-1_5p*

mirBase accessionNone
Sequence
0- UGAGUAAGAUGAUGAUUCGUUG -22
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Mature sequence

Tur-Novel-1_3p

mirBase accessionNone
Sequence
39- UCGGAUUGUCAUCUGAUUUGGG -61
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