MirGeneDB 3.0
MirGeneDB ID

Xla-Mir-203-P8-v1

Family name MIR-203 (all species)
Seed UGAAAUG
Species African clawed frog (Xenopus laevis)
MiRBase ID xla-mir-203
Paralogues Xla-Mir-203-P7-v1  Xla-Mir-203-P7-v2  Xla-Mir-203-P8-v2 
Orthologues Lch-Mir-203  Spt-Mir-203 
Node of Origin (locus) X. laevis
Node of Origin (family) Vertebrata
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030739.1: 10666658-10666717 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-203-P8-v1)		 Mir-203-P8-v1 NC_030739.1: 10666658-10666717 [-] UCSC Ensembl
Mir-203-P8-v2 NC_030739.1: 10666658-10666717 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGAUCUCGGAGGUUUCUGUCUCCCUGGCUGAGUGGUUCUUAACAGUUCAACAGUUCUCUAUCGAAAUUGUGAAAUGUUUAGGACCACUUGAUUUGGGGGACUCUCUCUUCUAAGGGUGCA
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Structure
        10          20        30        40        50          
GGAUCUCGGAGGUUUCU--|      UG CU          U    G    A   UUCUCU 
                   GUCUCCC  G  GAGUGGUUCU AACA UUCA CAG      \
                   CAGGGGG  U  UUCACCAGGA UUGU AAGU GUU      A
ACGUGGGAAUCUUCUCUCU^      UU AG          U    A    -   AAAGCU 
.       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Em
Star sequence

Xla-Mir-203-P8-v1_5p*
mirBase accessionMIMAT0046524
Sequence 
0- AGUGGUUCUUAACAGUUCAACAG -23
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Mature sequence

Xla-Mir-203-P8-v1_3p
mirBase accessionMIMAT0046525
Sequence 
38- GUGAAAUGUUUAGGACCACUUG -60
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