MirGeneDB 3.0

7 Ciona intestinalis microRNA genes of family LET-7 (all species)
Sort by genome coordinates Motifs Tissue expression
 +
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC C- C- C- C- C- C- C- C- C- C- Ga La La
Cin-Let-7-P1 cin-let-7d LET-7 GAGGUAG MIMAT0006089 MIMAT0015250 10 1022546 1022607 - Olfactores Bilateria No 1
Cin-Let-7-P2o1-v1 cin-let-7a-1 LET-7 GAGGUAG MIMAT0006086 MIMAT0015247 4 2157422 2157502 + C. intestinalis Bilateria Yes 1
Cin-Let-7-P2o1-v2 cin-let-7a-1 LET-7 UGAGGUA MIMAT0006086 MIMAT0015247 4 2157421 2157502 + C. intestinalis Bilateria Yes 1 1
Cin-Let-7-P2o2 cin-let-7f LET-7 GAGGUAG MIMAT0016842 MIMAT0016843 4 2157552 2157624 + C. intestinalis Bilateria Yes 1
Cin-Let-7-P2o3 cin-let-7b LET-7 UGAGGUA MIMAT0006087 MIMAT0015249 4 2157948 2158018 + C. intestinalis Bilateria Yes 1
Cin-Let-7-P2o4 cin-let-7c LET-7 GAGGUAG MIMAT0006088 None 4 2158141 2158206 + C. intestinalis Bilateria Yes 1
Cin-Let-7-P2o5 cin-let-7a-2 LET-7 GAGGUAG MIMAT0006086 MIMAT0015248 4 2158340 2158414 + C. intestinalis Bilateria Yes 1

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all

Download genome coordinates (GFF format)

Download count matrix