| MirGeneDB ID | Adi-Mir-2023-P1-v1 |
|---|
| Family name |
MIR-2023 (all species) |
|---|
| Seed |
AAGAAGU |
|---|
| Species |
Stony coral (Acropora digitifera) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Adi-Mir-2023-P1-v2
Adi-Mir-2023-P2-v1
Adi-Mir-2023-P2-v2
|
|---|
| Orthologues |
Asp-Mir-2023
Nve-Mir-2023
|
|---|
| Node of Origin (locus) |
A. digitifera
|
|---|
| Node of Origin (family) |
Hexacorallia
|
|---|
Genome context
(GCA_000222465.2_Adig_1.1_genomic) |
DF970767.1: 340585-340638 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UCUGGAGACUCUAACUAACAUCUUCUGUCUCUGCUACUUGGACUUUUUUCACGUUUAUCGAUGAAAGAAGUACAAGUGGUAGGGAUUGGGCUGUUAAUCUCAUCAAAGCAAAGU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UCUGGAGACUCUAACUA---| U CU G CGUU
ACA CUU GUCUCUGCUACUUG ACUUUUUUCA U
UGU GGG UAGGGAUGGUGAAC UGAAGAAAGU A
UGAAACGAAACUACUCUAAU^ C U- A AGCU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
| Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
| |
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| Star sequence |
Adi-Mir-2023-P1-v1_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- CUGCUACUUGGACUUUUUUCA -21
Get sequence
|
|---|
| Mature sequence |
Adi-Mir-2023-P1-v1_3p |
| mirBase accession | None |
|---|
| Sequence |
33- AAAGAAGUACAAGUGGUAGGG -54
Get sequence
|
|---|
