| MirGeneDB ID | Nve-Mir-2023 |
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| Family name |
MIR-2023 (all species) |
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| Seed |
AAGAAGU |
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| Species |
Starlet sea anemone (Nematostella vectensis) |
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| MiRBase ID |
nve-mir-2023
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
N. vectensis
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| Node of Origin (family) |
N. vectensis
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Genome context
(GCF_000209225.1_ASM20922v1_NVE) |
NW_001834120.1: 142060-142110 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GACGAGAAGAGUUGCGUGACAUACCUGUGUCUGCCACCUGUAUUUCUAUCACGUCAGAUGAAAGAAGUACAAGUGGUAGGGAAGGGUGUGUCGAUUGACAAUGGCGGCUUA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
GACGAGAAGAGUUGCGU--| GUG C A CGU
GACAUACCU UCUGCCAC UGUAUUUCU UCA \
CUGUGUGGG GGAUGGUG ACAUGAAGA AGU C
AUUCGGCGGUAACAGUUAG^ AAG A A AGA
. 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | UG at 5p(-14) |
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Tissue expression
|
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| Star sequence |
Nve-Mir-2023_5p* |
| mirBase accession | MIMAT0009755 |
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| Sequence |
0- CUGCCACCUGUAUUUCUAUCA -21
Get sequence
|
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| Mature sequence |
Nve-Mir-2023_3p |
| mirBase accession | MIMAT0009756 |
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| Sequence |
30- AAAGAAGUACAAGUGGUAGGG -51
Get sequence
|
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