| MirGeneDB ID | Adi-Mir-2023-P2-v2 |
|---|
| Family name |
MIR-2023 (all species) |
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| Seed |
AAGAAGU |
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| Species |
Stony coral (Acropora digitifera) |
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| MiRBase ID |
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| Paralogues |
Adi-Mir-2023-P1-v1
Adi-Mir-2023-P1-v2
Adi-Mir-2023-P2-v1
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| Orthologues |
Asp-Mir-2023
Nve-Mir-2023
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| Node of Origin (locus) |
A. digitifera
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| Node of Origin (family) |
Hexacorallia
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Genome context
(GCA_000222465.2_Adig_1.1_genomic) |
DF970767.1: 341603-341658 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AUCUGGAGACUCUAACUAACAUCUUCUGUCUCUGCUACUUGGACUUUUUUCACGUUUAUCGAUGAAAGAAGUACAAGUGGUAGGGAUUGGGCUGUUAAUCUCAUCAAAGCAAAGUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AUCUGGAGACUCUAACU---| U CU G CGUU
AACA CUU GUCUCUGCUACUUG ACUUUUUUCA U
UUGU GGG UAGGGAUGGUGAAC UGAAGAAAGU A
UUGAAACGAAACUACUCUAA^ C U- A AGCU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Ad |
Ad |
Ad |
Ad |
Ad |
Ad |
Ad |
La |
La |
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| Star sequence |
Adi-Mir-2023-P2-v2_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- UCUGCUACUUGGACUUUUUUCA -22
Get sequence
|
|---|
| Mature sequence |
Adi-Mir-2023-P2-v2_3p |
| mirBase accession | None |
|---|
| Sequence |
34- AAAGAAGUACAAGUGGUAGGGA -56
Get sequence
|
|---|
