| MirGeneDB ID | Asp-Mir-2023 |
|---|
| Family name |
MIR-2023 (all species) |
|---|
| Seed |
AAGAAGU |
|---|
| Species |
Deep-sea anemone (Actinernus sp.) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Adi-Mir-2023-P1-v1
Adi-Mir-2023-P1-v2
Adi-Mir-2023-P2-v1
Adi-Mir-2023-P2-v2
Nve-Mir-2023
|
|---|
| Node of Origin (locus) |
Hexacorallia
|
|---|
| Node of Origin (family) |
Hexacorallia
|
|---|
Genome context
(GCA_030867875.1_CUHK_Acti_1.0_genomic) |
JAOWCC010001368.1: 50318500-50318553 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UGACUGCCGGAUUGCGUGACAUGUCUGUUUCUGCUGCUUGUGCUUCUGUCACAUUAACUGAUGAAAGAAGUACAAGUGGUAGGGGAGGGCAUGUCCAUAACCAGGAAUUUACAG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UGACUGCCGGAUUGCGU--| G UU UG G CAUU
GACAUGUCU U CUGC CUUGUGCUUCU UCA A
CUGUACGGG G GAUG GAACAUGAAGA AGU A
GACAUUUAAGGACCAAUAC^ A GG GU A AGUC
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | UG at 5p(-14) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Asp-Mir-2023_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- CUGCUGCUUGUGCUUCUGUCA -21
Get sequence
|
|---|
| Mature sequence |
Asp-Mir-2023_3p |
| mirBase accession | None |
|---|
| Sequence |
33- AAAGAAGUACAAGUGGUAGGG -54
Get sequence
|
|---|
