| MirGeneDB ID | Adi-Mir-2030 |
|---|
| Family name |
MIR-2030 (all species) |
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| Seed |
AGCAUAA |
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| Species |
Stony coral (Acropora digitifera) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Asp-Mir-2030
Hvu-Mir-2030
Nve-Mir-2030
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| Node of Origin (locus) |
Cnidaria
|
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| Node of Origin (family) |
Cnidaria
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Genome context
(GCA_000222465.2_Adig_1.1_genomic) |
DF970696.1: 672030-672081 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UAUUGGAUUUCUGUUUACGGUUUAACUGGAUAGCAUAACAUUGUAAGAGAUCUUUAAAGGUCUCUUACAUUGUUGUGCUGCCUGGAAAAACUGAACUGACUGCAGUCCUUAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UAUUGGAUUUCUGUUUA--| AA UG A U UU
CGGUUU C G UAGCAUAACA UGUAAGAGAUC U
GUCAAA G C GUCGUGUUGU ACAUUCUCUGG A
AAUUCCUGACGUCAGUCAA^ AA GU C U AA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| Comment | The mature sequence might be monouridylated at the 3' end. |
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
| Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
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| Mature sequence |
Adi-Mir-2030_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UAGCAUAACAUUGUAAGAGAUC -22
Get sequence
|
|---|
| Star sequence |
Adi-Mir-2030_3p* |
| mirBase accession | None |
|---|
| Sequence |
30- UCUCUUACAUUGUUGUGCUGCC -52
Get sequence
|
|---|
