MirGeneDB ID | Asp-Mir-2030 |
Family name |
MIR-2030 (all species) |
Seed |
AGCAUAA |
Species |
Deep-sea anemone (Actinernus sp.) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Adi-Mir-2030
Hvu-Mir-2030
Nve-Mir-2030
|
Node of Origin (locus) |
Cnidaria
|
Node of Origin (family) |
Cnidaria
|
Genome context (GCA_030867875.1_CUHK_Acti_1.0_genomic) |
JAOWCC010001210.1: 66459574-66459625 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CAGAGUGGAGAAUCUUUUAGUGUAACCAAAUAGCAUAACAUUGUAAGAGAUUUUUAAAACCUCUUUACCGUGUUAUGCUGUCUGGAAAUGCUAUAUAAACCAAAGGGACACA
Get precursor sequence
|
Structure | 10 20 30 40 50
CAGAGUGGAGAAUCUUU-- AA A U -| AUUUU
UAGUGU CCA AUAGCAUAACAU GU AAGAG \
AUCGUA GGU UGUCGUAUUGUG CA UUCUC U
ACACAGGGAAACCAAAUAU AA C C U^ CAAAA
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Mature sequence |
Asp-Mir-2030_5p |
mirBase accession | None |
Sequence |
0- UAGCAUAACAUUGUAAGAGAUU -22
Get sequence
|
Star sequence |
Asp-Mir-2030_3p* |
mirBase accession | None |
Sequence |
29- CCUCUUUACCGUGUUAUGCUGUC -52
Get sequence
|