MirGeneDB 3.0

MirGeneDB ID

Asp-Mir-2030

Family name MIR-2030 (all species)
Seed AGCAUAA
Species Deep-sea anemone (Actinernus sp.)
MiRBase ID
Paralogues
Orthologues Adi-Mir-2030  Hvu-Mir-2030  Nve-Mir-2030 
Node of Origin (locus) Cnidaria
Node of Origin (family) Cnidaria
Genome context
(GCA_030867875.1_CUHK_Acti_1.0_genomic)
JAOWCC010001210.1: 66459574-66459625 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CAGAGUGGAGAAUCUUUUAGUGUAACCAAAUAGCAUAACAUUGUAAGAGAUUUUUAAAACCUCUUUACCGUGUUAUGCUGUCUGGAAAUGCUAUAUAAACCAAAGGGACACA
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Structure
        10          20        30        40         50     
CAGAGUGGAGAAUCUUU--      AA   A            U  -|    AUUUU 
                   UAGUGU  CCA AUAGCAUAACAU GU AAGAG     \
                   AUCGUA  GGU UGUCGUAUUGUG CA UUCUC     U
ACACAGGGAAACCAAAUAU      AA   C            C  U^    CAAAA 
110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Te Te Tr Tr
Mature sequence

Asp-Mir-2030_5p

mirBase accessionNone
Sequence
0- UAGCAUAACAUUGUAAGAGAUU -22
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Star sequence

Asp-Mir-2030_3p*

mirBase accessionNone
Sequence
29- CCUCUUUACCGUGUUAUGCUGUC -52
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