| MirGeneDB ID | Nve-Mir-2030 |
|---|
| Family name |
MIR-2030 (all species) |
|---|
| Seed |
AGCAUAA |
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| Species |
Starlet sea anemone (Nematostella vectensis) |
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| MiRBase ID |
nve-mir-2030
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Adi-Mir-2030
Asp-Mir-2030
Hvu-Mir-2030
|
|---|
| Node of Origin (locus) |
Cnidaria
|
|---|
| Node of Origin (family) |
Cnidaria
|
|---|
Genome context
(GCF_000209225.1_ASM20922v1_NVE) |
NW_001833907.1: 85589-85640 [-]
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
AACGACGAUGACACCCACAGUAUGGCCGUAUAGCAUAACAUUGUAAGAGAUUGUAAGAACCUCUUUACAUUGUUGUGCUGUACGGAUAUGCUGAAUAGUCACAGGCCUGUGG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AACGACGAUGACACCCA-- G U -| AUUGU
CAGUAUG CCGUAUAGCAUAACA UGU AAGAG \
GUCGUAU GGCAUGUCGUGUUGU ACA UUCUC A
GGUGUCCGGACACUGAUAA A U U^ CAAGA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
|
|
|---|
| Mature sequence |
Nve-Mir-2030_5p |
| mirBase accession | MIMAT0009780 |
|---|
| Sequence |
0- UAGCAUAACAUUGUAAGAGAUU -22
Get sequence
|
|---|
| Star sequence |
Nve-Mir-2030_3p* |
| mirBase accession | MIMAT0009781 |
|---|
| Sequence |
29- CCUCUUUACAUUGUUGUGCUGUA -52
Get sequence
|
|---|
