MirGeneDB 3.0
MirGeneDB ID

Agr-Mir-193-P1l

Family name MIR-193 (all species)
Seed GGAAUUU
Species West Indian fuzzy chiton (Acanthopleura granulata )
MiRBase ID
Paralogues Agr-Mir-193-P1m 
Orthologues Aae-Mir-193-P1  Aga-Mir-193-P1  Bge-Mir-193-P1  Cbr-Mir-193-P1-v1  Cbr-Mir-193-P1-v2  Cel-Mir-193-P1-v1  Cel-Mir-193-P1-v2  Cte-Mir-193-P1  Dan-Mir-193-P1-v1  Dan-Mir-193-P1-v2  Dan-Mir-193-P1-v3  Dan-Mir-193-P1-v4  Dgr-Mir-193-P1  Dlo-Mir-193-P1  Dma-Mir-193-P1  Dme-Mir-193-P1-v1  Dme-Mir-193-P1-v2  Dme-Mir-193-P1-v3  Dme-Mir-193-P1-v4  Dmo-Mir-193-P1-v1  Dmo-Mir-193-P1-v2  Dmo-Mir-193-P1-v3  Dmo-Mir-193-P1-v4  Dpu-Mir-193-P1  Dsi-Mir-193-P1-v1  Dsi-Mir-193-P1-v2  Dsi-Mir-193-P1-v3  Dsi-Mir-193-P1-v4  Dya-Mir-193-P1-v1  Dya-Mir-193-P1-v2  Dya-Mir-193-P1-v3  Dya-Mir-193-P1-v4  Eba-Mir-193-P1  Esc-Mir-193-P1  Gpa-Mir-193-P1  Hme-Mir-193-P1  Hru-Mir-193-P1  Isc-Mir-193-P1  Lgi-Mir-193-P1  Lhy-Mir-193-P1  Mgi-Mir-193-P1  Mom-Mir-193-P1  Npo-Mir-193-P1  Obi-Mir-193-P1  Ofu-Mir-193-P1  Ovu-Mir-193-P1  Pau-Mir-193-P1  Pcr-Mir-193-P1  Pma-Mir-193-P1  Pmi-Mir-193-P1  Pve-Mir-193-P1  Rph-Mir-193-P1  Snu-Mir-193-P1  Tca-Mir-193-P1  War-Mir-193-P1  Xbo-Mir-193-P1 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(GCA_016165875.1_ASM1616587v1_Acanthopleura_granula)		 JABBOT010000002.1: 38402771-38402831 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UUCCAAGCGGACUUAACAUUCCUUUCGAUUCGGAAUUUUACGGGCACAGAUGGAUGAUUUAAAAACUUCCACUGGCCCGCAAAGUCCCGCCCGGAAUUUUACGGGCACAGAUGGAUGAUUUAAAAACUUCCACUGGCCCGCAAAGUCCCGCCUUCAUUGGAGUGAUAACCAUCCUAGAUCAC
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Structure
        10          20        30        40        50          
UUCCAAGCGGACUUAAC--|    UUUCGAUUCGGAAUUUUACGGGCACAGAUGGAUGAUU 
                   AUUCC                                     \
                   UGAGG                                     U
CACUAGAUCCUACCAAUAG^    UUACUUCCGCCCUGAAACGCCCGGUCACCUUCAAAAA 
 .       110       100        90        80        70
Deep sequencing
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Le
Star sequence

Agr-Mir-193-P1l_5p* (predicted)
mirBase accessionNone
Sequence 
40- ACUGGCCCGCAAAGUCCCGCC -61
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Mature sequence

Agr-Mir-193-P1l_3p (predicted)
mirBase accessionNone
Sequence 
0- CGGAAUUUUACGGGCACAGAUGG -23
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