| MirGeneDB ID | Ava-Mir-12595-P2 |
|---|
| Family name |
MIR-12595 (all species) |
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| Seed |
AUCUGAC |
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| Species |
Bdelloid rotifer (Adineta vaga) |
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| MiRBase ID |
|
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| Paralogues |
Ava-Mir-12595-P1
|
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| Orthologues |
Bko-Mir-12595-P2
Bpl-Mir-12595-P2
Sne-Mir-12595
|
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| Node of Origin (locus) |
A. vaga
|
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| Node of Origin (family) |
Rotifera
|
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Genome context
(GCA_021613535.1_ASM2161353v1_AVA) |
CP075495.1: 7613244-7613305 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CAUAUAAAAAAAAGACUUCCAACGAUCGUCACAUGGCUAGCUGAUCAGUCAUAAAUGGAAAUAAACUUUUAUCUGACAGUUUAGCCGUGUAUGGAUCUGAGAAGAUUAAUCAACGCUUAUUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CAUAUAAAAAAAAGACUUCCAAC-- GUC -| A UC UGGAA
GAUC ACAUGGCU AGCUG UCAG AUAAA A
CUAG UGUGCCGA UUGAC AGUC UAUUU U
UUUAUUCGCAACUAAUUAGAAGAGU GUA U^ - -- UCAAA
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Ava-Mir-12595-P2_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- ACAUGGCUAGCUGAUCAGUCAUAAA -25
Get sequence
|
|---|
| Mature sequence |
Ava-Mir-12595-P2_3p |
| mirBase accession | None |
|---|
| Sequence |
39- UAUCUGACAGUUUAGCCGUGUAU -62
Get sequence
|
|---|
