MirGeneDB 3.0
MirGeneDB ID

Sne-Mir-12595

Family name MIR-12595 (all species)
Seed AUCUGAC
Species Seison (Seison nebaliae)
MiRBase ID
Paralogues
Orthologues Ava-Mir-12595-P1  Ava-Mir-12595-P2  Bko-Mir-12595-P1  Bko-Mir-12595-P2  Bpl-Mir-12595-P1  Bpl-Mir-12595-P2 
Node of Origin (locus) Rotifera
Node of Origin (family) Rotifera
Genome context
(S.nebaliae-strainB-GA2.2-3295Contigs_manual)		 k141_4112: 19126-19255 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
ACCAUUUCUUUUCCAAAAAUUCUUUUGAGCGCCUGGUGCACUGUUGGAUAUAUUGUUAAAUGAGUUCGAUGAAACUUUUGAUAGUACAAGUUUAUCAUUAUUAAUCGAUAAUGUAUCAAUCAUAAACUGCCAUUUGUAUAUCUGACAGGUAGCCAUGCGUCCAAAAAAUUUACUUAUCACCAUUUCUAUU
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Structure
        10        20          30        40        50        60        70        80        90    
ACCAUUUCUUUUCCAAAAAUUC--|    AG   C    GCA    UG     AUUGUUAAAUGAGUUCGAUGAAACUUUUGAUAGUACAAGUUU 
                        UUUUG  CGC UGGU   CUGU  GAUAU                                          A
                        AAAAC  GCG ACCG   GACA  CUAUA                                          U
UUAUCUUUACCACUAUUCAUUUAA^    CU   U    AUG    GU     UGUUUACCGUCAAAUACUAACUAUGUAAUAGCUAAUUAUUAC 
.       180       170       160       150       140       130       120       110       100
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Po
Star sequence

Sne-Mir-12595_5p*
mirBase accessionNone
Sequence 
0- GCCUGGUGCACUGUUGGAUAU -21
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Mature sequence

Sne-Mir-12595_3p
mirBase accessionNone
Sequence 
108- UAUCUGACAGGUAGCCAUGCGU -130
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