| MirGeneDB ID | Bko-Mir-12595-P2 |
|---|
| Family name |
MIR-12595 (all species) |
|---|
| Seed |
AUCUGAC |
|---|
| Species |
Monogonont Rotifer 2 (Brachionus koreanus) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Bko-Mir-12595-P1
|
|---|
| Orthologues |
Ava-Mir-12595-P2
Bpl-Mir-12595-P2
Sne-Mir-12595
|
|---|
| Node of Origin (locus) |
Brachionus
|
|---|
| Node of Origin (family) |
Rotifera
|
|---|
Genome context
(Brachionus_koreanusGCA_016987375.1_Bk_v0.5.4_genom) |
PJRA01000257.1: 2384-2444 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UUUCAAACAAAAAAAUUAUCAAAUAGUAGUUCGUGGCUCCUGGCAAGAAAAGGUAGUUUUUUAAAUUCCUAUCUGACAGGUAGCCAUGUUUUACUGUUUACUACUUUAUUUCUUCUACUCC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
UUUCAAACAAAAAAAUUAUC-- UU -| GCA AA UAGUUU
AAAUAGUAG CGUGGCU CCUG AGA AGG U
UUUGUCAUU GUACCGA GGAC UCU UCC U
CCUCAUCUUCUUUAUUUCAUCA UU U^ AG- A- UUAAAU
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Bko-Mir-12595-P2_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- UCGUGGCUCCUGGCAAGAAAAGG -23
Get sequence
|
|---|
| Mature sequence |
Bko-Mir-12595-P2_3p |
| mirBase accession | None |
|---|
| Sequence |
39- UAUCUGACAGGUAGCCAUGUUU -61
Get sequence
|
|---|
