MirGeneDB 3.0
MirGeneDB ID

Bko-Mir-12595-P1

Family name MIR-12595 (all species)
Seed AUCUGAC
Species Monogonont Rotifer 2 (Brachionus koreanus)
MiRBase ID
Paralogues Bko-Mir-12595-P2 
Orthologues Ava-Mir-12595-P1  Bpl-Mir-12595-P1  Sne-Mir-12595 
Node of Origin (locus) Brachionus
Node of Origin (family) Rotifera
Genome context
(Brachionus_koreanusGCA_016987375.1_Bk_v0.5.4_genom)		 PJRA01000198.1: 741472-741539 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AAUUUUAAAAUUUAAAAUUGAACUCAUUUUACGUGUCUACUUCUAGUUAGAUGCAUUGAUUUAUAAACCGUAUUUGUAUCUGACAAGUAGCCAUGUGGAUUUGGUCAAUUAGAUCGACAAACUGCUCU
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Structure
        10           20        30        40        50        60     
AAUUUUAAAAUUUAAAA---|   A  CAU        U      CUA          UUGAUUUAU 
                    UUGA CU   UUUACGUG CUACUU   GUUAGAUGCA         \
                    AACU GG   AGGUGUAC GAUGAA   CAGUCUAUGU         A
UCUCGUCAAACAGCUAGAUU^   -  UUU        C      ---          UUAUGCCAA 
      120       110        100        90           80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
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Star sequence

Bko-Mir-12595-P1_5p*
mirBase accessionNone
Sequence 
0- ACGUGUCUACUUCUAGUUAGAUGCA -25
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Mature sequence

Bko-Mir-12595-P1_3p
mirBase accessionNone
Sequence 
46- UAUCUGACAAGUAGCCAUGUGG -68
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