MirGeneDB 3.0

16 microRNA genes with node of origin Brachionus
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Bko-Mir-1-P22 None MIR-1 GGAAUGU None None PJRA01000444.1 1523881 1523940 - Brachionus Bilateria No 1
Bpl-Mir-1-P22 None MIR-1 GGAAUGU None None QEOQ01000226.1 1075395 1075454 - Brachionus Bilateria No 1
Bpl-Mir-1-P23 None MIR-1 GGAAUGU None None QEOQ01000508.1 2616878 2616960 + Brachionus Bilateria No 1
Bpl-Mir-36-P16 None MIR-36 CACCGGG None None QEOQ01000180.1 141578 141633 - Brachionus Protostomia No
Bpl-Mir-36-P18 None MIR-36 CACCGGG None None QEOQ01000180.1 141350 141410 - Brachionus Protostomia No
Bko-Mir-87-o7 None MIR-87 UGAGCAA None None PJRA01000263.1 5959829 5959907 - Brachionus Protostomia No 1
Bpl-Mir-87-o7 None MIR-87 UGAGCAA None None QEOQ01000573.1 507118 507197 + Brachionus Protostomia No 1
Bko-Mir-12595-P1 None MIR-12595 AUCUGAC None None PJRA01000198.1 741472 741539 - Brachionus Rotifera No 1
Bpl-Mir-12595-P1 None MIR-12595 AUCUGAC None None QEOQ01000487.1 32950 33015 - Brachionus Rotifera No 1
Bko-Mir-12595-P2 None MIR-12595 AUCUGAC None None PJRA01000257.1 2384 2444 + Brachionus Rotifera No
Bpl-Mir-12595-P2 None MIR-12595 AUCUGAC None None QEOQ01000433.1 273783 273841 - Brachionus Rotifera No 1
Bko-Mir-12600 None MIR-12600 GACUAGG None None PJRA01000160.1 1160233 1160293 - Brachionus Brachionus No
Bpl-Mir-12600 None MIR-12600 GACUAGG None None QEOQ01000041.1 165073 165130 + Brachionus Brachionus Unknown
Bpl-Mir-12601 None MIR-12601 AGGCCAU None None QEOQ01000590.1 664374 664431 - Brachionus Brachionus Unknown 1
Bko-Mir-12602 None MIR-12602 UUCACAA None None PJRA01000313.1 1985619 1985679 - Brachionus Brachionus No 1
Bpl-Mir-12602 None MIR-12602 UUCACAA None None QEOQ01000303.1 258833 258893 - Brachionus Brachionus No 1

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all