MirGeneDB 3.0

MirGeneDB ID

Bpl-Mir-12595-P2

Family name MIR-12595 (all species)
Seed AUCUGAC
Species Monogonont Rotifer 1 (Brachionus plicatilis)
MiRBase ID
Paralogues Bpl-Mir-12595-P1 
Orthologues Ava-Mir-12595-P2  Bko-Mir-12595-P2  Sne-Mir-12595 
Node of Origin (locus) Brachionus
Node of Origin (family) Rotifera
Genome context
(Bpl_ASM1027981)
QEOQ01000433.1: 273783-273841 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UUUGGAGAAAAAGAAAUUUCGAAUAGUAGUUCGUGGCUCCUGGCAAGAAAAGGUAGUCUUAAUUUCCUAUCUGACAGGUAGCCAUGUUUUACUGUUGAUAACUUACAGCAUUUAUCGCU
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Structure
        10           20        30         40        50         
UUUGGAGAAAAAGAAAUU---| G        UU       -    GCA   AA   UAGUC 
                     UC AAUAGUAG  CGUGGCU CCUG   AGA  AGG     U
                     AG UUGUCAUU  GUACCGA GGAC   UCU  UCC     U
UCGCUAUUUACGACAUUCAAU^ -        UU       U    AG-   A-   UUUAA 
       110       100         90        80         70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
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To
Star sequence

Bpl-Mir-12595-P2_5p* (predicted)

mirBase accessionNone
Sequence
0- UCGUGGCUCCUGGCAAGAAAAGG -23
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Mature sequence

Bpl-Mir-12595-P2_3p

mirBase accessionNone
Sequence
37- UAUCUGACAGGUAGCCAUGUUU -59
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