MirGeneDB 3.0
MirGeneDB ID

Ava-Mir-8-P17

Family name MIR-8 (all species)
Seed AAUACUG
Species Bdelloid rotifer (Adineta vaga)
MiRBase ID
Paralogues Ava-Mir-8-P16 
Orthologues Aae-Mir-8  Aga-Mir-8  Agr-Mir-8  Asu-Mir-8  Bge-Mir-8  Bko-Mir-8  Bpl-Mir-8  Cbr-Mir-8  Cel-Mir-8  Csc-Mir-8  Cte-Mir-8  Dan-Mir-8  Dgr-Mir-8  Dlo-Mir-8  Dma-Mir-8  Dme-Mir-8  Dmo-Mir-8  Dpu-Mir-8  Dsi-Mir-8  Dya-Mir-8  Eba-Mir-8  Egr-Mir-8  Esc-Mir-8  Gpa-Mir-8  Gsa-Mir-8  Hme-Mir-8  Hru-Mir-8  Isc-Mir-8  Lan-Mir-8  Lgi-Mir-8  Lhy-Mir-8  Llo-Mir-8  Mgi-Mir-8  Mom-Mir-8  Npo-Mir-8  Obi-Mir-8  Ofu-Mir-8  Ovu-Mir-8  Pau-Mir-8  Pca-Mir-8  Pdu-Mir-8  Pfl-Mir-8  Pmi-Mir-8  Pve-Mir-8  Rph-Mir-8  Sko-Mir-8  Sma-Mir-8  Snu-Mir-8  Spu-Mir-8  Tca-Mir-8  Tur-Mir-8  War-Mir-8 
Node of Origin (locus) A. vaga
Node of Origin (family) Nephrozoa
Genome context
(GCA_021613535.1_ASM2161353v1_AVA)		 CP075495.1: 9063692-9063754 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UCUUCUUUGUACUAUAGAGCAACUAAAUGUCAUCUUACUAUACAGCAUUAGUUCGAAAAUCAAGAAUUGCUAAUACUGUCAGGUAAAGAUGGCCUACGGACGCUCAUUCGACGAUUGUAAACA
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Structure
        10          20        30         40        50        60
UCUUCUUUGUACUAUAG--   AA  AAAU      -|    AU    C      UCGAAAA 
                   AGC  CU    GUCAUC UUACU  ACAG AUUAGU       U
                   UCG  GG    CGGUAG AAUGG  UGUC UAAUCG       C
ACAAAUGUUAGCAGCUUAC   CA  CAUC      A^    AC    A      UUAAGAA 
 120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
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Star sequence

Ava-Mir-8-P17_5p*
mirBase accessionNone
Sequence 
0- CAUCUUACUAUACAGCAUUAGU -22
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Mature sequence

Ava-Mir-8-P17_3p
mirBase accessionNone
Sequence 
40- UAAUACUGUCAGGUAAAGAUGGC -63
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