| MirGeneDB ID | Ava-Mir-92-P24 |
|---|
| Family name |
MIR-92 (all species) |
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| Seed |
AUUGCAC |
|---|
| Species |
Bdelloid rotifer (Adineta vaga) |
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| MiRBase ID |
|
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| Paralogues |
Ava-Mir-92-P25
|
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| Orthologues |
Asu-Mir-92
Cel-Mir-92
Esc-Mir-92
Gsp-Mir-92
Hmi-Mir-92
Isc-Mir-92
Obi-Mir-92
Pmi-Mir-92-o24
Sme-Mir-92
|
|---|
| Node of Origin (locus) |
A. vaga
|
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| Node of Origin (family) |
Bilateria
|
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Genome context
(GCA_021613535.1_ASM2161353v1_AVA) |
CP075497.1: 9444288-9444348 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GAAAAUCGAACAUAAAUAAACAGUACGACCAGGUCGAUGUUACUGCAAUUUGUCGAAAAAUUAGAAUCAUAUUGCACUACAUUCGAUCUCGUCGUUAUUGUGUUUUACAUCGUCGUCAAGU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GAAAAUCGAACAUAAAUAA- - C -| UAC U UCGAAAA
ACAGU ACGAC AGGUCG AUGU UGCAAU UG \
UGUUA UGCUG UCUAGC UACA ACGUUA AC A
UGAACUGCUGCUACAUUUUG U C U^ UC- U UAAGAUU
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Ava-Mir-92-P24_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AGGUCGAUGUUACUGCAAUUUG -22
Get sequence
|
|---|
| Mature sequence |
Ava-Mir-92-P24_3p |
| mirBase accession | None |
|---|
| Sequence |
39- UAUUGCACUACAUUCGAUCUCG -61
Get sequence
|
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