| MirGeneDB ID | Ava-Mir-92-P25 |
|---|
| Family name |
MIR-92 (all species) |
|---|
| Seed |
AUUGCAC |
|---|
| Species |
Bdelloid rotifer (Adineta vaga) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Ava-Mir-92-P24
|
|---|
| Orthologues |
Asu-Mir-92
Cel-Mir-92
Esc-Mir-92
Gsp-Mir-92
Hmi-Mir-92
Isc-Mir-92
Obi-Mir-92
Pmi-Mir-92-o25
Sme-Mir-92
|
|---|
| Node of Origin (locus) |
A. vaga
|
|---|
| Node of Origin (family) |
Bilateria
|
|---|
Genome context
(GCA_021613535.1_ASM2161353v1_AVA) |
CP075492.1: 6980551-6980611 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
GAAAAGAAAAGAUGAAGAACCAAUGCGACUAGGUCGGUGUCAAUGCAAUUUGUUGAUAAAUUAUAAUCAUAUUGCACUACAUUCGAUCUCGUAGUCAUUGUGUUAUGUGACGUCGAAAAGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GAAAAGAAAAGAUGAAGA - - G U -| CAA U UUGAUAA
AC CAAUG C AC AGGUCG GUGU UGCAAU UG \
UG GUUAC G UG UCUAGC UACA ACGUUA AC A
AGAAAAGCUGCAGUGUAU U U A C U^ UC- U UAAUAUU
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Ava-Mir-92-P25_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AGGUCGGUGUCAAUGCAAUUUG -22
Get sequence
|
|---|
| Mature sequence |
Ava-Mir-92-P25_3p |
| mirBase accession | None |
|---|
| Sequence |
39- UAUUGCACUACAUUCGAUCUCG -61
Get sequence
|
|---|
