| MirGeneDB ID | Bge-Mir-6012 |
|---|
| Family name |
MIR-6012 (all species) |
|---|
| Seed |
GGCUGAC |
|---|
| Species |
Cockroach (Blattella germanica) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Dlo-Mir-6012-v1
Dlo-Mir-6012-v2
Tca-Mir-6012
|
|---|
| Node of Origin (locus) |
Neoptera
|
|---|
| Node of Origin (family) |
Neoptera
|
|---|
Genome context
(Bger_2.0) |
KZ616466.1: 152009-152075 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
AGGAGGUCUAACAGUUGGGGCGGGGUUUACAGGCUGACCUCUUCACCUGUGGAAAUGUGAAUUGAGAUUAGACAUUUCGGCGAUGAGAUCAGCCAGUAGAACCCAGUCCAGAGCGAACAAGGAUCAU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AGGAGGUCUAACAGUUG- G -| A C U A UGUG GUGAAUUG
GGGC GGG UUUAC GGCUGA CUC UC CC GAAAU \
CCUG CCC AGAUG CCGACU GAG AG GG CUUUA A
UACUAGGAACAAGCGAGA A A^ A A U C ---- CAGAUUAG
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | UGUG in loop |
|---|
Tissue expression
|
| Ad |
Ad |
Co |
Co |
Di |
Di |
Eg |
Eg |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Mature sequence |
Bge-Mir-6012_5p |
| mirBase accession | None |
|---|
| Sequence |
0- AGGCUGACCUCUUCACCUGUGGAAAU -26
Get sequence
|
|---|
| Co-mature sequence |
Bge-Mir-6012_3p |
| mirBase accession | None |
|---|
| Sequence |
45- UUCGGCGAUGAGAUCAGCCAGU -67
Get sequence
|
|---|
