| MirGeneDB ID | Dlo-Mir-6012-v2 |
|---|
| Family name |
MIR-6012 (all species) |
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| Seed |
UUCGGCG |
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| Species |
Braconid wasp (Diachasmimorpha longicaudata) |
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| MiRBase ID |
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| Paralogues |
Dlo-Mir-6012-v1
|
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| Orthologues |
Bge-Mir-6012
Tca-Mir-6012
|
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| Node of Origin (locus) |
Neoptera
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| Node of Origin (family) |
Neoptera
|
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Genome context
(GCF_034640455.1_iyDiaLong2_genomic) |
NC_087234.1: 3682468-3682530 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GGAGGAUUGCGCUGUUGGGGCAGGGUUAACAGGCUGAUAUUGUCGGGCGGGGUGUGGAACACGAAAGUCAUUUCGGCGAUGAGAUCAGCCUGUCAAACCCGGCACCACUCCUGCCACAAGAGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GGAGGAUUGCGCUGUUGGG- A A-| A UG GG GG UGGAAC
GC GGGUU ACAGGCUGAU U UCG CG GUG A
CG CCCAA UGUCCGACUA A AGC GC UAC C
AGAGAACACCGUCCUCACCA G AC^ G GU G- UU UGAAAG
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Dlo-Mir-6012-v2_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AGGCUGAUAUUGUCGGGCGGGGUG -24
Get sequence
|
|---|
| Mature sequence |
Dlo-Mir-6012-v2_3p |
| mirBase accession | None |
|---|
| Sequence |
40- UUUCGGCGAUGAGAUCAGCCUGU -63
Get sequence
|
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