| MirGeneDB ID | Dlo-Mir-6012-v1 |
|---|
| Family name |
MIR-6012 (all species) |
|---|
| Seed |
UCGGCGA |
|---|
| Species |
Braconid wasp (Diachasmimorpha longicaudata) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Dlo-Mir-6012-v2
|
|---|
| Orthologues |
Bge-Mir-6012
Tca-Mir-6012
|
|---|
| Node of Origin (locus) |
Neoptera
|
|---|
| Node of Origin (family) |
Neoptera
|
|---|
Genome context
(GCF_034640455.1_iyDiaLong2_genomic) |
NC_087234.1: 3682468-3682530 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
GGAGGAUUGCGCUGUUGGGGCAGGGUUAACAGGCUGAUAUUGUCGGGCGGGGUGUGGAACACGAAAGUCAUUUCGGCGAUGAGAUCAGCCUGUCAAACCCGGCACCACUCCUGCCACAAGAGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GGAGGAUUGCGCUGUUGGG- A A-| A UG GG GG GUGGAAC
GC GGGUU ACAGGCUGAU U UCG CG GU A
CG CCCAA UGUCCGACUA A AGC GC UA C
AGAGAACACCGUCCUCACCA G AC^ G GU G- UU CUGAAAG
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17), UGUG in loop |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Dlo-Mir-6012-v1_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AGGCUGAUAUUGUCGGGCGGGGU -23
Get sequence
|
|---|
| Mature sequence |
Dlo-Mir-6012-v1_3p |
| mirBase accession | None |
|---|
| Sequence |
41- UUCGGCGAUGAGAUCAGCCUGU -63
Get sequence
|
|---|
