| MirGeneDB ID | Tca-Mir-6012 |
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| Family name |
MIR-6012 (all species) |
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| Seed |
UCGGCGA |
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| Species |
Red flour beetle (Tribolium castaneum) |
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| MiRBase ID |
tca-mir-6012
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| Paralogues |
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| Orthologues |
Bge-Mir-6012
Dlo-Mir-6012-v1
Dlo-Mir-6012-v2
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| Node of Origin (locus) |
Neoptera
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| Node of Origin (family) |
Neoptera
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Genome context
(Tcas5.2) |
LG3: 7388637-7388698 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AAAGACAAUCUGGUGGUGUGCAGGGUGAACAGACUGAUCUUGUUUCUGCGGAAAUGUUAGUUACAGUCAUUUCGGCGAUGAGAUCAGCCUGUCGAACCCAGCUCGAGUUCGUUCAACACUUU
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
AAAGACAAUCUGGUGGU- U A GA-| A UG UCU G AAUGUUAGU
G GC GGGU ACAG CUGAUCU UU GC GA \
C CG CCCA UGUC GACUAGA AG CG CU U
UUUCACAACUUGCUUGAG U A AGC^ C GU --- G UUACUGACA
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | UG at 5p(-14) |
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Tissue expression
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| Ad |
Ea |
Em |
Em |
Em |
Em |
Em |
Fe |
Fe |
Fe |
Fe |
Oo |
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| Star sequence |
Tca-Mir-6012_5p* (predicted) |
| mirBase accession | MIMAT0023565 |
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| Sequence |
0- AGACUGAUCUUGUUUCUGCGGA -22
Get sequence
|
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| Mature sequence |
Tca-Mir-6012_3p |
| mirBase accession | MIMAT0023566 |
|---|
| Sequence |
40- UUCGGCGAUGAGAUCAGCCUGU -62
Get sequence
|
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