MirGeneDB 3.0
MirGeneDB ID

Cbr-Let-7-P5

Family name LET-7 (all species)
Seed GAGGUAG
Species Roundworm (Caenorhabditis briggsae)
MiRBase ID cbr-let-7
Paralogues Cbr-Let-7-P6  Cbr-Let-7-P7  Cbr-Let-7-P8 
Orthologues Aae-Let-7  Aga-Let-7  Agr-Let-7  Asu-Let-7-P5  Bge-Let-7  Bko-Let-7  Bpl-Let-7  Cel-Let-7-P5  Cte-Let-7  Dan-Let-7  Dlo-Let-7  Dma-Let-7  Dme-Let-7  Dmo-Let-7  Dpu-Let-7  Dsi-Let-7  Dya-Let-7  Eba-Let-7  Egr-Let-7  Esc-Let-7  Gpa-Let-7  Gsa-Let-7  Gsp-Let-7  Hme-Let-7  Hmi-Let-7  Hru-Let-7  Isc-Let-7  Lan-Let-7  Lgi-Let-7  Lhy-Let-7  Llo-Let-7  Mgi-Let-7  Mom-Let-7  Npo-Let-7  Obi-Let-7  Ofu-Let-7  Ovu-Let-7  Pau-Let-7  Pca-Let-7  Pcr-Let-7  Pdu-Let-7  Pfl-Let-7  Ple-Let-7  Pmi-Let-7  Pve-Let-7  Rph-Let-7  Sko-Let-7  Sma-Let-7  Sne-Let-7  Snu-Let-7  Spu-Let-7  Sro-Let-7  Tca-Let-7  Tur-Let-7  War-Let-7  Xbo-Let-7 
Node of Origin (locus) Chromadorea
Node of Origin (family) Bilateria
Genome context
(CB4)		 X: 18534133-18534197 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GCAGGAUGAUGGCUCUACACUGGGGUACGGUGAGGUAGUAGGUUGUAUAGUUUAGAAUAUUACUCUCGGUGAACUAUGCAAGUUUCUACCUCACCGAAUACCAGGUUCUCAACUGCAUCGUGUCA
Get precursor sequence
Structure
        10          20        30        40        50        60  
GCAGGAUGAUGGCUCUACA--|   GG A           U  G          UAGAAUAUU 
                     CUGG  U CGGUGAGGUAG AG UUGUAUAGUU         \
                     GACC  A GCCACUCCAUC UU AACGUAUCAA         A
ACUGUGCUACGUCAACUCUUG^   AU A           U  G          GUGGCUCUC 
   120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ea Ma Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Yo Yo
Mature sequence

Cbr-Let-7-P5_5p
mirBase accessionMIMAT0000463
Sequence 
0- UGAGGUAGUAGGUUGUAUAGUU -22
Get sequence
Star sequence

Cbr-Let-7-P5_3p*
mirBase accessionNone
Sequence 
43- CUAUGCAAGUUUCUACCUCACC -65
Get sequence