| MirGeneDB ID | Cja-Mir-134 |
|---|---|
| Family name | MIR-134 (all species) |
| Seed | GUGACUG |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-134 Cfa-Mir-134 Cpo-Mir-134 Dno-Mir-134 Eca-Mir-134 Hsa-Mir-134 Mml-Mir-134 Mmr-Mir-134 Mmu-Mir-134 Ocu-Mir-134 Pab-Mir-134 Rno-Mir-134 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021924.1: 131869096-131869156 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GAGAUGUUGGUGUCAGCACCGUCCAGGGUGUGUGACUGGUUGACCAGAGGGGCGUGCACUGUGUUCACCCUGUGGGCCACCUAGUCACCAACCCUCAGCAUCACUCCCACCCCAGGAAGACGet precursor sequence |
| Structure | 10 20 30 40 50 GAGAUGUUGGUGUCAGCACC-- CC GU U A-| G GCGUGCA GU AGGGU GUGACUGG UG CCA AGGG C CG UCCCA CACUGAUC AC GGU UCCC U CAGAAGGACCCCACCCUCACUA AC AC C CG^ G ACUUGUG . 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Cja-Mir-134_5p |
| mirBase accession | None |
| Sequence |
0- UGUGACUGGUUGACCAGAGGGG -22
Get sequence
|
| Star sequence | Cja-Mir-134_3p* (predicted) |
| mirBase accession | None |
| Sequence |
38- CCUGUGGGCCACCUAGUCACCAA -61
Get sequence
|
