| MirGeneDB ID | Pab-Mir-134 |
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| Family name |
MIR-134 (all species) |
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| Seed |
GUGACUG |
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| Species |
Sumatran orangutan (Pongo abelii) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Bta-Mir-134
Cfa-Mir-134
Cja-Mir-134
Cpo-Mir-134
Dno-Mir-134
Eca-Mir-134
Hsa-Mir-134
Mml-Mir-134
Mmr-Mir-134
Mmu-Mir-134
Ocu-Mir-134
Rno-Mir-134
|
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
|
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Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054694.2: 105486693-105486754 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GAGAUGUUGGUGUCAGCACCGUCCAGGGUGUGUGACUGGUUGACCAGAGGGGCAUGCACUGUGUUCACCCUGUGGGCCACCUAGUCACCAACCCUCAGCAUCACUCCCACUCCAGGAAGACU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
GAGAUGUUGGUGUCAGCACC--- CC GU U A-| G GCAUGCA
GU AGGGU GUGACUGG UG CCA AGGG C
CG UCCCA CACUGAUC AC GGU UCCC U
UCAGAAGGACCUCACCCUCACUA AC AC C CG^ G ACUUGUG
120 110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Pab-Mir-134_5p |
| mirBase accession | None |
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| Sequence |
0- UGUGACUGGUUGACCAGAGGGG -22
Get sequence
|
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| Star sequence |
Pab-Mir-134_3p* |
| mirBase accession | None |
|---|
| Sequence |
39- CUGUGGGCCACCUAGUCACCAAC -62
Get sequence
|
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