| MirGeneDB ID | Pab-Mir-134 |
|---|---|
| Family name | MIR-134 (all species) |
| Seed | GUGACUG |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-134 Cfa-Mir-134 Cja-Mir-134 Cpo-Mir-134 Dno-Mir-134 Eca-Mir-134 Hsa-Mir-134 Mml-Mir-134 Mmr-Mir-134 Mmu-Mir-134 Ocu-Mir-134 Rno-Mir-134 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054694.2: 105486693-105486754 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GAGAUGUUGGUGUCAGCACCGUCCAGGGUGUGUGACUGGUUGACCAGAGGGGCAUGCACUGUGUUCACCCUGUGGGCCACCUAGUCACCAACCCUCAGCAUCACUCCCACUCCAGGAAGACUGet precursor sequence |
| Structure | 10 20 30 40 50 GAGAUGUUGGUGUCAGCACC--- CC GU U A-| G GCAUGCA GU AGGGU GUGACUGG UG CCA AGGG C CG UCCCA CACUGAUC AC GGU UCCC U UCAGAAGGACCUCACCCUCACUA AC AC C CG^ G ACUUGUG 120 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Pab-Mir-134_5p |
| mirBase accession | None |
| Sequence |
0- UGUGACUGGUUGACCAGAGGGG -22
Get sequence
|
| Star sequence | Pab-Mir-134_3p* |
| mirBase accession | None |
| Sequence |
39- CUGUGGGCCACCUAGUCACCAAC -62
Get sequence
|
