| MirGeneDB ID | Cja-Mir-2114 |
|---|---|
| Family name | MIR-2114 (all species) |
| Seed | AGUCCCU |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Cfa-Mir-2114 Dno-Mir-2114 Eca-Mir-2114 Hsa-Mir-2114 Laf-Mir-2114 Mml-Mir-2114 Pab-Mir-2114 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021937.1: 141973025-141973083 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UCCAAAGAGAGGCCUCUGCCUCCAUGCUCCUAGUCCCUUCCUUGAAGCGGUCGGAUAAUCACAUGAUGAGCCUCAAGCAAGGGACUUCAAGCUGGUGGCUUCCGGCAGCUAGCUUCCUGGet precursor sequence |
| Structure | 10 20 30 40 50 UCCAAAGAGAGGCCUCU---| U U CCU C A G- GGAUA GCC CCA GCU AGUCCCUU CUUGA GC GUC A CGG GGU CGA UCAGGGAA GAACU CG UAG U GUCCUUCGAUCGACGGCCUU^ U - ACU C C AG UACAC 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
| Mature sequence | Cja-Mir-2114_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UAGUCCCUUCCUUGAAGCGGUC -22
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|
| Co-mature sequence | Cja-Mir-2114_3p (predicted) |
| mirBase accession | None |
| Sequence |
36- UGAGCCUCAAGCAAGGGACUUCA -59
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|
