MirGeneDB 3.0

MirGeneDB ID

Eca-Mir-2114

Family name MIR-2114 (all species)
Seed GCCUCAA
Species Horse (Equus caballus)
MiRBase ID eca-mir-2114
Paralogues
Orthologues Cfa-Mir-2114  Cja-Mir-2114  Dno-Mir-2114  Hsa-Mir-2114  Laf-Mir-2114  Mml-Mir-2114  Pab-Mir-2114 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_002863925.1_EquCab3.0)
CM009179.1: 123270384-123270442 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUCAGGGACAGGCCAUGGCCUCCAUGCUCCUAGUCCCUUCCUUGAAGGGUCGGAUAAGUCACAUGACGAGCCUCAAGCAAGGGACUUUGAGCUGGUGGCUCCCAGCAGCCUCCUGUUCC
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Structure
        10           20        30        40        50         
CUCAGGGACAGGCCAUG---|  U   U    CU        C     A  G   GAUAAG 
                    GCC CCA GCUC  AGUCCCUU CUUGA GG UCG      U
                    CGG GGU CGAG  UCAGGGAA GAACU CC AGC      C
CCUUGUCCUCCGACGACCCU^  U   -    UU        C     -  G   AGUACA 
       110       100         90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ps Bo Ca Em En En En En En En En Gl He He Ho Im Ki Li Lo Lu Ma Ma Mi Pl Sp Te Tr Ut Ut Yo
Star sequence

Eca-Mir-2114_5p*

mirBase accessionNone
Sequence
0- UAGUCCCUUCCUUGAAGGGUCG -22
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Mature sequence

Eca-Mir-2114_3p

mirBase accessionMIMAT0034714
Sequence
38- AGCCUCAAGCAAGGGACUUUG -59
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