| MirGeneDB ID | Eca-Mir-2114 |
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| Family name |
MIR-2114 (all species) |
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| Seed |
GCCUCAA |
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| Species |
Horse (Equus caballus) |
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| MiRBase ID |
eca-mir-2114
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| Paralogues |
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| Orthologues |
Cfa-Mir-2114
Cja-Mir-2114
Dno-Mir-2114
Hsa-Mir-2114
Laf-Mir-2114
Mml-Mir-2114
Pab-Mir-2114
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
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Genome context
(GCA_002863925.1_EquCab3.0) |
CM009179.1: 123270384-123270442 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CUCAGGGACAGGCCAUGGCCUCCAUGCUCCUAGUCCCUUCCUUGAAGGGUCGGAUAAGUCACAUGACGAGCCUCAAGCAAGGGACUUUGAGCUGGUGGCUCCCAGCAGCCUCCUGUUCC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CUCAGGGACAGGCCAUG---| U U CU C A G GAUAAG
GCC CCA GCUC AGUCCCUU CUUGA GG UCG U
CGG GGU CGAG UCAGGGAA GAACU CC AGC C
CCUUGUCCUCCGACGACCCU^ U - UU C - G AGUACA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
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| Star sequence |
Eca-Mir-2114_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- UAGUCCCUUCCUUGAAGGGUCG -22
Get sequence
|
|---|
| Mature sequence |
Eca-Mir-2114_3p |
| mirBase accession | MIMAT0034714 |
|---|
| Sequence |
38- AGCCUCAAGCAAGGGACUUUG -59
Get sequence
|
|---|
