| MirGeneDB ID | Laf-Mir-2114 |
|---|---|
| Family name | MIR-2114 (all species) |
| Seed | AGUCCCU |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Cfa-Mir-2114 Cja-Mir-2114 Dno-Mir-2114 Eca-Mir-2114 Hsa-Mir-2114 Mml-Mir-2114 Pab-Mir-2114 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010138.1: 546639-546698 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | ACCAAGGACAGGCCGCAGCCUCCGUGCUCCUAGUCCCUUCCUUGAAGAGGUCGGAUAAGCCACAUGAUGAGUCUCAAGCAAGGGACUUGGAGCUGGCAGCUUCUAGCAGCUUCCUGCUCCGet precursor sequence |
| Structure | 10 20 30 40 50 ACCAAGGACAGGCCGCA---| CU U U C A G-- GGAUAA GC CCG GCUCC AGUCCCUU CUUGA GA GUC \ CG GGU CGAGG UCAGGGAA GAACU CU UAG G CCUCGUCCUUCGACGAUCUU^ AC - U C - GAG UACACC . 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Laf-Mir-2114_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UAGUCCCUUCCUUGAAGAGGUC -22
Get sequence
|
| Co-mature sequence | Laf-Mir-2114_3p (predicted) |
| mirBase accession | None |
| Sequence |
37- UGAGUCUCAAGCAAGGGACUUGG -60
Get sequence
|
