| MirGeneDB ID | Pab-Mir-2114 |
|---|
| Family name |
MIR-2114 (all species) |
|---|
| Seed |
AGUCCCU |
|---|
| Species |
Sumatran orangutan (Pongo abelii) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Cfa-Mir-2114
Cja-Mir-2114
Dno-Mir-2114
Eca-Mir-2114
Hsa-Mir-2114
Laf-Mir-2114
Mml-Mir-2114
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
|---|
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054702.2: 156696862-156696920 [+]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
GCCAAAGACUGGCCUCUGCCUCCAUGCUCCUAGUCCCUUCCUUGAAGCGGUCGGAUAAUCACAUGACGAGCCUCAAGCAAGGGACUUCAAGCUGGUGGCUUCCAGCAGCUAGCUUCCUG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GCCAAAGACUGGCCUCU---| U U CCU C A G- GGAUA
GCC CCA GCU AGUCCCUU CUUGA GC GUC A
CGG GGU CGA UCAGGGAA GAACU CG CAG U
GUCCUUCGAUCGACGACCUU^ U - ACU C C AG UACAC
110 100 90 80 70 60 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Pab-Mir-2114_5p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- UAGUCCCUUCCUUGAAGCGGUC -22
Get sequence
|
|---|
| Co-mature sequence |
Pab-Mir-2114_3p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
36- CGAGCCUCAAGCAAGGGACUUCA -59
Get sequence
|
|---|
