MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-3059

Family name MIR-3059 (all species)
Seed UUCCUCU
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-3059  Cfa-Mir-3059  Cpo-Mir-3059  Dno-Mir-3059  Eca-Mir-3059  Ete-Mir-3059  Hsa-Mir-3059  Laf-Mir-3059  Mml-Mir-3059  Mmr-Mir-3059  Mmu-Mir-3059  Ocu-Mir-3059  Pab-Mir-3059  Rno-Mir-3059 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021923.1: 91006771-91006828 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUACACAGGUGUAACGCAGGUGGUACACCCUUUCCUCUCUGCCCCAUAGGGUGUAGCUCUAACUACCCUCUAGGGAAGAGAAGGUUGGGUGAACAGCCUUACUAUUUCUUCAGCUCAG
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Structure
        10          20        30         40        50        
UUACACAGGUGUAACGC--|   G  A     UUU   -    G   CAU     GUAGC 
                   AGGU GU CACCC   CCU CUCU CCC   AGGGU     U
                   UCCG CA GUGGG   GGA GAGA GGG   UCCCA     C
GACUCGACUUCUUUAUCAU^   A  A     UU-   A    A   AUC     UCAAU 
      110       100        90         80        70        60
Deep sequencing
3' NTU Unknown
MotifsNo
Tissue expression
-   +
To
Mature sequence

Cja-Mir-3059_5p (predicted)
mirBase accessionNone
Sequence 
0- UUUCCUCUCUGCCCCAUAGGGU -22
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Star sequence

Cja-Mir-3059_3p* (predicted)
mirBase accessionNone
Sequence 
36- CCUCUAGGGAAGAGAAGGUUGG -58
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