| MirGeneDB ID | Cja-Mir-3059 |
|---|---|
| Family name | MIR-3059 (all species) |
| Seed | UUCCUCU |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-3059 Cfa-Mir-3059 Cpo-Mir-3059 Dno-Mir-3059 Eca-Mir-3059 Ete-Mir-3059 Hsa-Mir-3059 Laf-Mir-3059 Mml-Mir-3059 Mmr-Mir-3059 Mmu-Mir-3059 Ocu-Mir-3059 Pab-Mir-3059 Rno-Mir-3059 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021923.1: 91006771-91006828 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UUACACAGGUGUAACGCAGGUGGUACACCCUUUCCUCUCUGCCCCAUAGGGUGUAGCUCUAACUACCCUCUAGGGAAGAGAAGGUUGGGUGAACAGCCUUACUAUUUCUUCAGCUCAGGet precursor sequence |
| Structure | 10 20 30 40 50 UUACACAGGUGUAACGC--| G A UUU - G CAU GUAGC AGGU GU CACCC CCU CUCU CCC AGGGU U UCCG CA GUGGG GGA GAGA GGG UCCCA C GACUCGACUUCUUUAUCAU^ A A UU- A A AUC UCAAU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Mature sequence | Cja-Mir-3059_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UUUCCUCUCUGCCCCAUAGGGU -22
Get sequence
|
| Star sequence | Cja-Mir-3059_3p* (predicted) |
| mirBase accession | None |
| Sequence |
36- CCUCUAGGGAAGAGAAGGUUGG -58
Get sequence
|
