MirGeneDB 3.0

MirGeneDB ID

Mmu-Mir-3059

Family name MIR-3059 (all species)
Seed UUCCUCU
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-3059
Paralogues
Orthologues Bta-Mir-3059  Cfa-Mir-3059  Cja-Mir-3059  Cpo-Mir-3059  Dno-Mir-3059  Eca-Mir-3059  Ete-Mir-3059  Hsa-Mir-3059  Laf-Mir-3059  Mml-Mir-3059  Mmr-Mir-3059  Ocu-Mir-3059  Pab-Mir-3059  Rno-Mir-3059 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(mm10)
chr10: 101772704-101772761 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUACACAGGUGUAUCACAGGUGGUACGCCCUUUCCUCUCUGCCCCAUAGGGUGUAGCUCUAACUACCCUCUAGGGAAGAGAAGGUUGGGUGAACAGCCUUACUAUUUCUACAACUCAG
Get precursor sequence
Structure
        10          20        30         40        50        
UUACACAGGUGUAUCAC--|   G  A     UUU   -    G   CAU      UAGC 
                   AGGU GU CGCCC   CCU CUCU CCC   AGGGUG    U
                   UCCG CA GUGGG   GGA GAGA GGG   UCCCAU    C
GACUCAACAUCUUUAUCAU^   A  A     UU-   A    A   AUC      CAAU 
      110       100        90         80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Br Br Ce Ce Em Em He Ki Li Lu Ov Pa Sk Sp Te
Mature sequence

Mmu-Mir-3059_5p

mirBase accessionMIMAT0014811
Sequence
0- UUUCCUCUCUGCCCCAUAGGGUGU -24
Get sequence
Proposed targets TargetScanVert: mmu-miR-3059-5p
miRDB: MIMAT0014811
Star sequence

Mmu-Mir-3059_3p*

mirBase accessionMIMAT0014812
Sequence
36- CCUCUAGGGAAGAGAAGGUUGG -58
Get sequence
Proposed targets TargetScanVert: mmu-miR-3059-3p
miRDB: MIMAT0014812