MirGeneDB 3.0
MirGeneDB ID

Cpo-Mir-3059

Family name MIR-3059 (all species)
Seed UUCCUCU
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-3059
Paralogues
Orthologues Bta-Mir-3059  Cfa-Mir-3059  Cja-Mir-3059  Dno-Mir-3059  Eca-Mir-3059  Ete-Mir-3059  Hsa-Mir-3059  Laf-Mir-3059  Mml-Mir-3059  Mmr-Mir-3059  Mmu-Mir-3059  Ocu-Mir-3059  Pab-Mir-3059  Rno-Mir-3059 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(cavPor3)		 scaffold_9: 13779749-13779806 [+] UCSC
Precursor
(pre-Mir +30nt flank)
UUAUACAGGUGUAACACAGGUGGUACGCCCUUUCCUCUCUGCCCCAUAGGGUGUAGCUCUAACUGCCCUCUAGGGAAGAGAAGGUUGGGUGAGCAGCCUCCAGCUCAAUGGCUACCAG
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Structure
        10          20        30         40        50        
UUAUACAGGUGUAACAC--|   G  A     UUU   -    G   CAU     GUAGC 
                   AGGU GU CGCCC   CCU CUCU CCC   AGGGU     U
                   UCCG CG GUGGG   GGA GAGA GGG   UCCCG     C
GACCAUCGGUAACUCGACC^   A  A     UU-   A    A   AUC     UCAAU 
      110       100        90         80        70        60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
Bl Bl Bl Bl Oo Oo Oo Oo To Wh
Mature sequence

Cpo-Mir-3059_5p
mirBase accessionMIMAT0047433
Sequence 
0- UUUCCUCUCUGCCCCAUAGGGUGU -24
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Star sequence

Cpo-Mir-3059_3p* (predicted)
mirBase accessionMIMAT0047434
Sequence 
36- CCUCUAGGGAAGAGAAGGUUGG -58
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