| MirGeneDB ID | Cja-Mir-605 |
|---|---|
| Family name | MIR-605 (all species) |
| Seed | GAAGGUG |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Hsa-Mir-605-v1 Hsa-Mir-605-v2 Mml-Mir-605-v1 Mml-Mir-605-v2 Pab-Mir-605 |
| Node of Origin (locus) | Simiiformes |
| Node of Origin (family) | Simiiformes |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021926.1: 75613422-75613478 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UAACAUUCGUCUGAAGCCCUAGCUUGGUUCUAAAUCCCCUGGUGCAUUCUCCUUGGAAAAAACAGAGAAGGUGCUAUGGGAUUUAGGACCAAAUUAUGGCUACAAAAAGGUUAUAGGGet precursor sequence |
| Structure | 10 20 30 40 50 UAACAUUCGUCUGAAGC- -| C C UG A CUUGGA CC UAG UUGGUUCUAAAUCCC UGG C UUCUC \ GG AUU AACCAGGAUUUAGGG AUC G AAGAG A GGAUAUUGGAAAAACAUC U^ A U GU G ACAAAA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Star sequence | Cja-Mir-605_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- UAAAUCCCCUGGUGCAUUCUCC -22
Get sequence
|
| Mature sequence | Cja-Mir-605_3p (predicted) |
| mirBase accession | None |
| Sequence |
35- AGAAGGUGCUAUGGGAUUUAGG -57
Get sequence
|
