| MirGeneDB ID | Pab-Mir-605 |
|---|
| Family name |
MIR-605 (all species) |
|---|
| Seed |
GAAGGCA |
|---|
| Species |
Sumatran orangutan (Pongo abelii) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Cja-Mir-605
Hsa-Mir-605-v1
Hsa-Mir-605-v2
Mml-Mir-605-v1
Mml-Mir-605-v2
|
|---|
| Node of Origin (locus) |
Simiiformes
|
|---|
| Node of Origin (family) |
Simiiformes
|
|---|
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054687.2: 93133259-93133315 [-]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UAACUUGUGUCUCUAGCCCUAGCUUGGUUCUAAAUCCCAUGGUGCCUUCUCCUUGGGAAAAACAGAGAAGGCACUAUGGGAUUUAGAACCAAGUUGGGACUACAGAUACAGGUACCU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UAACUUGUGUCUCUAGC--| CUUGGG
CCUAGCUUGGUUCUAAAUCCCAUGGUGCCUUCUC \
GGGUUGAACCAAGAUUUAGGGUAUCACGGAAGAG A
UCCAUGGACAUAGACAUCA^ ACAAAA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
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| Star sequence |
Pab-Mir-605_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- UAAAUCCCAUGGUGCCUUCUCC -22
Get sequence
|
|---|
| Mature sequence |
Pab-Mir-605_3p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
35- AGAAGGCACUAUGGGAUUUAGA -57
Get sequence
|
|---|
