| MirGeneDB ID | Cja-Mir-672 |
|---|---|
| Family name | MIR-672 (all species) |
| Seed | GAGGUUG |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Cpo-Mir-672 Dno-Mir-672 Ete-Mir-672 Laf-Mir-672 Mmr-Mir-672 Mmu-Mir-672 Ocu-Mir-672 Rno-Mir-672 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021937.1: 69317628-69317687 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UUACAAAACGGUGAUCUAGCCCUUUCGUUUUGAGGUUGGUGUAUUAUGUGUGAGUAUACAUAUUUAUCACACACAGUCACUGUCUUAAAAAGUGAAGGUGCAUAUAUUUCUCAGCCAUCUGet precursor sequence |
| Structure | 10 20 30 40 50 UUACAAAACGGUGAUCUA- - CG-| GUU U A GUAUAC GC CCUUU UUUUGAG GGUG AUU UGUGUGA \ CG GGAAG AAAAUUC UCAC UGA ACACACU A UCUACCGACUCUUUAUAUA U UGA^ UG- - C AUUUAU . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Mature sequence | Cja-Mir-672_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UGAGGUUGGUGUAUUAUGUGUGA -23
Get sequence
|
| Star sequence | Cja-Mir-672_3p* (predicted) |
| mirBase accession | None |
| Sequence |
38- ACACACAGUCACUGUCUUAAAA -60
Get sequence
|
