MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-672

Family name MIR-672 (all species)
Seed GAGGUUG
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Cpo-Mir-672  Dno-Mir-672  Ete-Mir-672  Laf-Mir-672  Mmr-Mir-672  Mmu-Mir-672  Ocu-Mir-672  Rno-Mir-672 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021937.1: 69317628-69317687 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUACAAAACGGUGAUCUAGCCCUUUCGUUUUGAGGUUGGUGUAUUAUGUGUGAGUAUACAUAUUUAUCACACACAGUCACUGUCUUAAAAAGUGAAGGUGCAUAUAUUUCUCAGCCAUCU
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Structure
        10         20          30        40        50          
UUACAAAACGGUGAUCUA-  -     CG-|      GUU    U   A       GUAUAC 
                   GC CCUUU   UUUUGAG   GGUG AUU UGUGUGA      \
                   CG GGAAG   AAAAUUC   UCAC UGA ACACACU      A
UCUACCGACUCUUUAUAUA  U     UGA^      UG-    -   C       AUUUAU 
.       110       100        90         80         70
Deep sequencing
3' NTU Unknown
MotifsNo
Tissue expression
-   +
To
Mature sequence

Cja-Mir-672_5p (predicted)
mirBase accessionNone
Sequence 
0- UGAGGUUGGUGUAUUAUGUGUGA -23
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Star sequence

Cja-Mir-672_3p* (predicted)
mirBase accessionNone
Sequence 
38- ACACACAGUCACUGUCUUAAAA -60
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