MirGeneDB 3.0

MirGeneDB ID

Rno-Mir-672

Family name MIR-672 (all species)
Seed GAGGUUG
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-672
Paralogues
Orthologues Cja-Mir-672  Cpo-Mir-672  Dno-Mir-672  Ete-Mir-672  Laf-Mir-672  Mmr-Mir-672  Mmu-Mir-672  Ocu-Mir-672 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(rn6)
chrX: 74982080-74982139 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUUCAAGAUGGUGAUCUAGCCCUUUAGUUUUGAGGUUGGUGUACUGUGUGUGAGUAUACAUAUUUAUCACACACAGUCGCCAUCUUCGAAAGUGAGGGUGCACAUCUUUCUCAGCCAUCU
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Structure
        10         20         30        40        50          
GUUCAAGAUGGUGAUCUA-  -|     G        U     U           GUAUAC 
                   GC CCUUUA UUUUGAGG UGGUG ACUGUGUGUGA      \
                   CG GGGAGU AAAGCUUC ACCGC UGACACACACU      A
UCUACCGACUCUUUCUACA  U^     G        U     -           AUUUAU 
.       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
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Mature sequence

Rno-Mir-672_5p

mirBase accessionMIMAT0005327
Sequence
0- UGAGGUUGGUGUACUGUGUGUGA -23
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Proposed targets microrna.org: MIMAT0005327
TargetScanVert: rno-miR-672-5p
miRDB: MIMAT0005327
Star sequence

Rno-Mir-672_3p*

mirBase accessionMIMAT0017312
Sequence
38- ACACACAGUCGCCAUCUUCGAA -60
Get sequence
Proposed targets TargetScanVert: rno-miR-672-3p
miRDB: MIMAT0017312