MirGeneDB 3.0

MirGeneDB ID

Ocu-Mir-672

Family name MIR-672 (all species)
Seed GAGGUUG
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-672
Paralogues
Orthologues Cja-Mir-672  Cpo-Mir-672  Dno-Mir-672  Ete-Mir-672  Laf-Mir-672  Mmr-Mir-672  Mmu-Mir-672  Rno-Mir-672 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(oryCun2_add)
chrUn0059: 1030796-1030855 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUACAAGAUGGUGAUCUAGCCCUUUAGUUUUGAGGUUGGUGUACUGUGUGUGAGUAUACAUAUUUAUCACACACAGUCACUAUCUUCGAAAGUGAGGGUGCACAUCUUUCUCAGCCAUCU
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Structure
        10         20         30        40        50          
UUACAAGAUGGUGAUCUA-  -|     G        U     U           GUAUAC 
                   GC CCUUUA UUUUGAGG UGGUG ACUGUGUGUGA      \
                   CG GGGAGU AAAGCUUC AUCAC UGACACACACU      A
UCUACCGACUCUUUCUACA  U^     G        U     -           AUUUAU 
.       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
He Ki Te To Wh
Mature sequence

Ocu-Mir-672_5p

mirBase accessionMIMAT0048557
Sequence
0- UGAGGUUGGUGUACUGUGUGUGA -23
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Star sequence

Ocu-Mir-672_3p*

mirBase accessionMIMAT0048558
Sequence
38- ACACACAGUCACUAUCUUCGAA -60
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