| MirGeneDB ID | Cja-Mir-770 |
|---|---|
| Family name | MIR-770 (all species) |
| Seed | CCAGUAC |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Eca-Mir-770 Hsa-Mir-770 Mml-Mir-770 Mmr-Mir-770 Mmu-Mir-770 Pab-Mir-770 Rno-Mir-770 |
| Node of Origin (locus) | Boreoeutheria |
| Node of Origin (family) | Boreoeutheria |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021924.1: 131654447-131654508 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AUUCAUGUGUCAGGAGCCACCUUCUGAGCCUCCAGUACCAUGUGUCAGGACCACAUGAACUGGGCAUUGUGGGCCUGACAUGGUGCUGGGGCCUCAGGGGUCUGCUCUUCUCCUCUUUCAGAGet precursor sequence |
| Structure | 10 20 30 40 50 60 AUUCAUGUGUCAGGAGCC---| U C UG A UGAAC ACCU CUGAG CUCCAGUACCA UGUCAGG CCACA U UGGG GACUC GGGGUCGUGGU ACAGUCC GGUGU G AGACUUUCUCCUCUUCUCGUC^ - C -- G UACGG 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Cja-Mir-770_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UCCAGUACCAUGUGUCAGGACCACA -25
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|
| Star sequence | Cja-Mir-770_3p* (predicted) |
| mirBase accession | None |
| Sequence |
39- UGGGCCUGACAUGGUGCUGGGGC -62
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|
