| MirGeneDB ID | Cja-Mir-770 |
|---|
| Family name |
MIR-770 (all species) |
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| Seed |
CCAGUAC |
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| Species |
White-tufted-ear marmoset (Callithrix jacchus) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Eca-Mir-770
Hsa-Mir-770
Mml-Mir-770
Mmr-Mir-770
Mmu-Mir-770
Pab-Mir-770
Rno-Mir-770
|
|---|
| Node of Origin (locus) |
Boreoeutheria
|
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| Node of Origin (family) |
Boreoeutheria
|
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Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021924.1: 131654447-131654508 [+]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
AUUCAUGUGUCAGGAGCCACCUUCUGAGCCUCCAGUACCAUGUGUCAGGACCACAUGAACUGGGCAUUGUGGGCCUGACAUGGUGCUGGGGCCUCAGGGGUCUGCUCUUCUCCUCUUUCAGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AUUCAUGUGUCAGGAGCC---| U C UG A UGAAC
ACCU CUGAG CUCCAGUACCA UGUCAGG CCACA U
UGGG GACUC GGGGUCGUGGU ACAGUCC GGUGU G
AGACUUUCUCCUCUUCUCGUC^ - C -- G UACGG
120 110 100 90 80 70 |
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| Deep sequencing |
|
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| 3' NTU |
Unknown
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Cja-Mir-770_5p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- UCCAGUACCAUGUGUCAGGACCACA -25
Get sequence
|
|---|
| Star sequence |
Cja-Mir-770_3p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
39- UGGGCCUGACAUGGUGCUGGGGC -62
Get sequence
|
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