MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-770

Family name MIR-770 (all species)
Seed UGGGCCC
Species Horse (Equus caballus)
MiRBase ID eca-mir-770
Paralogues
Orthologues Cja-Mir-770  Hsa-Mir-770  Mml-Mir-770  Mmr-Mir-770  Mmu-Mir-770  Pab-Mir-770  Rno-Mir-770 
Node of Origin (locus) Boreoeutheria
Node of Origin (family) Boreoeutheria
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009171.1: 43150346-43150401 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-770)		 Mir-770 CM009171.1: 43150346-43150401 [+] UCSC Ensembl
Mir-493 CM009171.1: 43167648-43167710 [+] UCSC Ensembl
Mir-337 CM009171.1: 43177992-43178051 [+] UCSC Ensembl
Mir-431 CM009171.1: 43183848-43183911 [+] UCSC Ensembl
Mir-433 CM009171.1: 43184725-43184798 [+] UCSC Ensembl
Mir-127 CM009171.1: 43185829-43185884 [+] UCSC Ensembl
Mir-432 CM009171.1: 43187318-43187386 [+] UCSC Ensembl
Mir-136-v1 CM009171.1: 43187505-43187560 [+] UCSC Ensembl
Mir-136-v2 CM009171.1: 43187505-43187560 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACGUGUCAGGAGCCGCCCUUCCGUGCCUCCAGCACCACGUGUCUGGGCCAUGUGAGCAAGGUCACAUGGGCCCGAUGUGGUGCUGGGGGCGGCAGGGCUCUGCUCUUCUCUUCUUU
Get precursor sequence
Structure
        10        20          30        40         50        
ACGUGUCAGGAGCCGCCCU   - -|                GUC      -    GAGC 
                   UCC G UGCCUCCAGCACCACGU   UGGGCC AUGU    A
                   GGG C GCGGGGGUCGUGGUGUA   GCCCGG UACA    A
UUUCUUCUCUUCUCGUCUC   A G^                ---      G    CUGG 
    110       100        90        80           70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Ps Bo Ca Em En En En En En En En Gl He He Ho Im Ki Li Lo Lu Ma Ma Mi Pl Sp Te Tr Ut Ut Yo
Star sequence

Eca-Mir-770_5p*
mirBase accessionMIMAT0013174
Sequence 
0- AGCACCACGUGUCUGGGCCAUGU -23
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Mature sequence

Eca-Mir-770_3p
mirBase accessionNone
Sequence 
35- AUGGGCCCGAUGUGGUGCUGG -56
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