MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-431

Family name MIR-431 (all species)
Seed GUCUUGC
Species Horse (Equus caballus)
MiRBase ID eca-mir-431
Paralogues
Orthologues Bta-Mir-431  Cfa-Mir-431  Cja-Mir-431  Cpo-Mir-431  Ete-Mir-431  Hsa-Mir-431  Laf-Mir-431  Mml-Mir-431  Mmr-Mir-431  Mmu-Mir-431  Ocu-Mir-431  Pab-Mir-431  Rno-Mir-431 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009171.1: 43183848-43183911 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-431)		 Mir-770 CM009171.1: 43150346-43150401 [+] UCSC Ensembl
Mir-493 CM009171.1: 43167648-43167710 [+] UCSC Ensembl
Mir-337 CM009171.1: 43177992-43178051 [+] UCSC Ensembl
Mir-431 CM009171.1: 43183848-43183911 [+] UCSC Ensembl
Mir-433 CM009171.1: 43184725-43184798 [+] UCSC Ensembl
Mir-127 CM009171.1: 43185829-43185884 [+] UCSC Ensembl
Mir-432 CM009171.1: 43187318-43187386 [+] UCSC Ensembl
Mir-136-v2 CM009171.1: 43187505-43187560 [+] UCSC Ensembl
Mir-136-v1 CM009171.1: 43187505-43187560 [+] UCSC Ensembl
Mir-370 CM009171.1: 43212467-43212523 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCUGCACGUCGUCCUGCUCGUCCUGCGAGGUGUCUUGCAGGCCGUCAUGCAGGCCACACUGACGGUAACGUUGCAGGUCGUCUUGCAGGGCUUCUCGCAAGACGACAUCUUCAUCACCAACGAC
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Structure
        10          20        30        40        50        60 
CCUGCACGUCGUCCUGC--|    C       U          C  UCA    GGCCACACU 
                   UCGUC UGCGAGG GUCUUGCAGG CG   UGCA         G
                   AGCAG ACGCUCU CGGGACGUUC GC   ACGU         A
CAGCAACCACUACUUCUAC^    A       U          U  UGG    UGCAAUGGC 
  120       110       100        90        80        70
Deep sequencing
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CommentThere are Dicer cuts +2 and +3 on the 3p arm.
3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er
Mature sequence

Eca-Mir-431_5p
mirBase accessionMIMAT0013156
Sequence 
0- UGUCUUGCAGGCCGUCAUGCA -21
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Co-mature sequence

Eca-Mir-431_3p
mirBase accessionNone
Sequence 
43- CAGGUCGUCUUGCAGGGCUUC -64
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