| MirGeneDB ID | Ocu-Mir-431 |
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| Family name |
MIR-431 (all species) |
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| Seed |
GUCUUGC |
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| Species |
Rabbit (Oryctolagus cuniculus) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Bta-Mir-431
Cfa-Mir-431
Cpo-Mir-431
Ete-Mir-431
Hsa-Mir-431
Mml-Mir-431
Mmu-Mir-431
Rno-Mir-431
|
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| Node of Origin (locus) |
Eutheria
|
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| Node of Origin (family) |
Eutheria
|
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Genome context
(oryCun2_add) |
JABWOR010004011.1: 1419561-1419624 [+]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
ACACGUCGUUGGCCUGCGCGCCCUGCGAGCUGUCUUGCAGGCCGUCACGCAGGCCACUCUGACGGUAACGUUGCAGGUCGUCUUGCAGGGCUUCUCGCAAGGCGACAUCCUCAUCGCCGACGAC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
ACACGUCGUUGGCCUGCG--| C CU C UCAC GGCCACUCU
CGCC UGCGAG GUCUUGCAGG CG GCA G
GCGG ACGCUC CGGGACGUUC GC CGU A
CAGCAGCCGCUACUCCUACA^ A UU U UGGA UGCAAUGGC
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| Comment | Not in assembly but in trace archive. |
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| 3' NTU |
Yes
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Ocu-Mir-431_5p |
| mirBase accession | None |
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| Sequence |
0- UGUCUUGCAGGCCGUCACGCA -21
Get sequence
|
|---|
| Co-mature sequence |
Ocu-Mir-431_3p |
| mirBase accession | None |
|---|
| Sequence |
43- CAGGUCGUCUUGCAGGGCUUC -64
Get sequence
|
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