MirGeneDB 3.0

MirGeneDB ID

Ocu-Mir-431

Family name MIR-431 (all species)
Seed GUCUUGC
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-431  Cfa-Mir-431  Cja-Mir-431  Cpo-Mir-431  Eca-Mir-431  Ete-Mir-431  Hsa-Mir-431  Laf-Mir-431  Mml-Mir-431  Mmr-Mir-431  Mmu-Mir-431  Pab-Mir-431  Rno-Mir-431 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(oryCun2_add)
JABWOR010004011.1: 1419561-1419624 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACACGUCGUUGGCCUGCGCGCCCUGCGAGCUGUCUUGCAGGCCGUCACGCAGGCCACUCUGACGGUAACGUUGCAGGUCGUCUUGCAGGGCUUCUCGCAAGGCGACAUCCUCAUCGCCGACGAC
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Structure
        10          20        30        40        50        60 
ACACGUCGUUGGCCUGCG--|   C      CU          C  UCAC   GGCCACUCU 
                    CGCC UGCGAG  GUCUUGCAGG CG    GCA         G
                    GCGG ACGCUC  CGGGACGUUC GC    CGU         A
CAGCAGCCGCUACUCCUACA^   A      UU          U  UGGA   UGCAAUGGC 
  120       110       100        90        80        70
Deep sequencing
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CommentNot in assembly but in trace archive.
3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
 +
He Ki Te To Wh
Mature sequence

Ocu-Mir-431_5p

mirBase accessionNone
Sequence
0- UGUCUUGCAGGCCGUCACGCA -21
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Co-mature sequence

Ocu-Mir-431_3p

mirBase accessionNone
Sequence
43- CAGGUCGUCUUGCAGGGCUUC -64
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