MirGeneDB 3.0

MirGeneDB ID

Laf-Mir-431

Family name MIR-431 (all species)
Seed GUCUUGC
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues
Orthologues Bta-Mir-431  Cfa-Mir-431  Cja-Mir-431  Cpo-Mir-431  Eca-Mir-431  Ete-Mir-431  Hsa-Mir-431  Mml-Mir-431  Mmr-Mir-431  Mmu-Mir-431  Ocu-Mir-431  Pab-Mir-431  Rno-Mir-431 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)
GL010036.1: 75664666-75664729 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCACAGUGCUCUCUUGAUCGUCCUGCGGGGUGUCUUGCAGGCCGUCAUGCAGGCCACCUUGACGGUAACGUUGCAGGUCGCCCUGCGGGGCUUCUCGCAAGACGACAUUCUCCUCGUUAACGAU
Get precursor sequence
Structure
        10          20        30        40        50        60 
GCACAGUGCUCUCUUGA--|    C       U          C  UCA    GGCCACCUU 
                   UCGUC UGCGGGG GUCUUGCAGG CG   UGCA         G
                   AGCAG ACGCUCU CGGGGCGUCC GC   ACGU         A
UAGCAAUUGCUCCUCUUAC^    A       U          C  UGG    UGCAAUGGC 
  120       110       100        90        80        70
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
 +
Wh
Mature sequence

Laf-Mir-431_5p (predicted)

mirBase accessionNone
Sequence
0- UGUCUUGCAGGCCGUCAUGCA -21
Get sequence
Co-mature sequence

Laf-Mir-431_3p (predicted)

mirBase accessionNone
Sequence
43- CAGGUCGCCCUGCGGGGCUUC -64
Get sequence