| MirGeneDB ID | Pab-Mir-431 |
|---|---|
| Family name | MIR-431 (all species) |
| Seed | GUCUUGC |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-431 Cfa-Mir-431 Cja-Mir-431 Cpo-Mir-431 Eca-Mir-431 Ete-Mir-431 Hsa-Mir-431 Laf-Mir-431 Mml-Mir-431 Mmr-Mir-431 Mmu-Mir-431 Ocu-Mir-431 Rno-Mir-431 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054694.2: 105307145-105307208 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GCACGUCGUUGUCCUGCUUGUCCUGCGAGGUGUCUUGCAGGCCGUCAUGCAGGCCACACUGACGGUAACGUUGCAGGUCGUCUUGCAGGGCUUCUCGCAAGACGACAUCCUCAUCACCAACGACGet precursor sequence |
| Structure | 10 20 30 40 50 60 GCACGUCGUUGUCCUGC--| C U C UCA GGCCACACU UUGUC UGCGAGG GUCUUGCAGG CG UGCA G AGCAG ACGCUCU CGGGACGUUC GC ACGU A CAGCAACCACUACUCCUAC^ A U U UGG UGCAAUGGC 120 110 100 90 80 70 |
| Deep sequencing | |
| Comment | There are multiple Dicer cuts ranging from +1 to +3 on the 3p arm. |
| 3' NTU | No |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Pab-Mir-431_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UGUCUUGCAGGCCGUCAUGCA -21
Get sequence
|
| Co-mature sequence | Pab-Mir-431_3p |
| mirBase accession | None |
| Sequence |
43- CAGGUCGUCUUGCAGGGCUUC -64
Get sequence
|
