MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-433

Family name MIR-433 (all species)
Seed UCAUGAU
Species Horse (Equus caballus)
MiRBase ID eca-mir-433
Paralogues
Orthologues Bta-Mir-433  Cfa-Mir-433  Cja-Mir-433  Cpo-Mir-433  Dno-Mir-433  Ete-Mir-433  Hsa-Mir-433  Laf-Mir-433  Mml-Mir-433  Mmr-Mir-433  Mmu-Mir-433  Ocu-Mir-433  Pab-Mir-433  Rno-Mir-433 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009171.1: 43184725-43184798 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-433)		 Mir-770 CM009171.1: 43150346-43150401 [+] UCSC Ensembl
Mir-493 CM009171.1: 43167648-43167710 [+] UCSC Ensembl
Mir-337 CM009171.1: 43177992-43178051 [+] UCSC Ensembl
Mir-431 CM009171.1: 43183848-43183911 [+] UCSC Ensembl
Mir-433 CM009171.1: 43184725-43184798 [+] UCSC Ensembl
Mir-127 CM009171.1: 43185829-43185884 [+] UCSC Ensembl
Mir-432 CM009171.1: 43187318-43187386 [+] UCSC Ensembl
Mir-136-v2 CM009171.1: 43187505-43187560 [+] UCSC Ensembl
Mir-136-v1 CM009171.1: 43187505-43187560 [+] UCSC Ensembl
Mir-370 CM009171.1: 43212467-43212523 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAAGAAGAAGACCCAAUGCCCGGGGAGAAGUACGGUGAGCCUGUCAUUAUUCAGAGAGGCUAGAUCCUCUGUGUUAAGAAGGAUCAUGAUGGGCUCCUCGGUGUUCUCCAGGUAGCGGCACCACACCAUGAAGG
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Structure
        10           20        30        40        50        60      
GAAGAAGAAGACCCAAU-  --| GG      GUA   U           U    AGAGAGGCUAGAU 
                  GC  CC  GGAGAA   CGG GAGCCUGUCAU AUUC             C
                  CG  GG  CCUCUU   GCU CUCGGGUAGUA UAGG             C
GGAAGUACCACACCACGG  AU^ A-      GUG   C           C    AAGAAUUGUGUCU 
  130       120       110        100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Ps Bo Ca Em En En En En En En En Gl He He Ho Im Ki Li Lo Lu Ma Ma Mi Pl Sp Te Tr Ut Ut Yo
Star sequence

Eca-Mir-433_5p*
mirBase accessionNone
Sequence 
0- UACGGUGAGCCUGUCAUUAUUC -22
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Mature sequence

Eca-Mir-433_3p
mirBase accessionMIMAT0013158
Sequence 
52- AUCAUGAUGGGCUCCUCGGUGU -74
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