MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-433

Family name MIR-433 (all species)
Seed UCAUGAU
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-433  Cfa-Mir-433  Cpo-Mir-433  Dno-Mir-433  Eca-Mir-433  Ete-Mir-433  Hsa-Mir-433  Laf-Mir-433  Mml-Mir-433  Mmr-Mir-433  Mmu-Mir-433  Ocu-Mir-433  Pab-Mir-433  Rno-Mir-433 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021924.1: 131689358-131689431 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAAGAAGAAGACCCAGUGGCCGGGGAGAAGUACGGUGAGCCUGUCAUUAUUCAGAGAGGCUAGAUCCUCUGUGUUGAGAAGGAUCAUGAUGGGCUCCUCGGUGUUCUCCAGGUAGCGGCACCACACCAUGAAGG
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Structure
        10           20        30        40        50        60      
GAAGAAGAAGACCCAGUG---|  GG      GUA   U           U    AGAGAGGCUAGAU 
                     GCC  GGAGAA   CGG GAGCCUGUCAU AUUC             C
                     UGG  CCUCUU   GCU CUCGGGUAGUA UAGG             C
GGAAGUACCACACCACGGCGA^  A-      GUG   C           C    AAGAGUUGUGUCU 
  130       120       110        100        90        80        70
Deep sequencing
3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Cja-Mir-433_5p* (predicted)
mirBase accessionNone
Sequence 
0- UACGGUGAGCCUGUCAUUAUUC -22
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Mature sequence

Cja-Mir-433_3p (predicted)
mirBase accessionNone
Sequence 
52- AUCAUGAUGGGCUCCUCGGUGU -74
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