| MirGeneDB ID | Cja-Mir-433 |
|---|---|
| Family name | MIR-433 (all species) |
| Seed | UCAUGAU |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-433 Cfa-Mir-433 Cpo-Mir-433 Dno-Mir-433 Eca-Mir-433 Ete-Mir-433 Hsa-Mir-433 Laf-Mir-433 Mml-Mir-433 Mmr-Mir-433 Mmu-Mir-433 Ocu-Mir-433 Pab-Mir-433 Rno-Mir-433 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021924.1: 131689358-131689431 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GAAGAAGAAGACCCAGUGGCCGGGGAGAAGUACGGUGAGCCUGUCAUUAUUCAGAGAGGCUAGAUCCUCUGUGUUGAGAAGGAUCAUGAUGGGCUCCUCGGUGUUCUCCAGGUAGCGGCACCACACCAUGAAGGGet precursor sequence |
| Structure | 10 20 30 40 50 60 GAAGAAGAAGACCCAGUG---| GG GUA U U AGAGAGGCUAGAU GCC GGAGAA CGG GAGCCUGUCAU AUUC C UGG CCUCUU GCU CUCGGGUAGUA UAGG C GGAAGUACCACACCACGGCGA^ A- GUG C C AAGAGUUGUGUCU 130 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
| Star sequence | Cja-Mir-433_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- UACGGUGAGCCUGUCAUUAUUC -22
Get sequence
|
| Mature sequence | Cja-Mir-433_3p (predicted) |
| mirBase accession | None |
| Sequence |
52- AUCAUGAUGGGCUCCUCGGUGU -74
Get sequence
|
