MirGeneDB 3.0

MirGeneDB ID

Dno-Mir-433

Family name MIR-433 (all species)
Seed ACGGUGA
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-433
Paralogues
Orthologues Bta-Mir-433  Cfa-Mir-433  Cja-Mir-433  Cpo-Mir-433  Eca-Mir-433  Ete-Mir-433  Hsa-Mir-433  Laf-Mir-433  Mml-Mir-433  Mmr-Mir-433  Mmu-Mir-433  Ocu-Mir-433  Pab-Mir-433  Rno-Mir-433 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(dasNov3)
JH578221: 4095-4168 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-433)
Mir-433 JH578221: 4095-4168 [+] UCSC Ensembl
Mir-127 JH578221: 5211-5266 [+] UCSC Ensembl
Mir-432 JH578221: 6661-6729 [+] UCSC Ensembl
Mir-136-v1 JH578221: 6860-6915 [+] UCSC Ensembl
Mir-136-v2 JH578221: 6860-6915 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAAGAAGCCGAGCCAGCGGCCGGGGAGAAGUACGGUGAGCCUGUCAUUAUUCAGAGAGGCAUGAUCCUCAUCUUUGAGAAGAAUCAUGAUGGGCUCCUCGGUGUUCUCCAGGUAGCGGCGCCACACCAUGAAGG
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Structure
        10           20        30        40        50        60      
GAAGAAGCCGAGCCAGCG---|  GG      GUA   U           U    AGAGAGGCAUGAU 
                     GCC  GGAGAA   CGG GAGCCUGUCAU AUUC             C
                     UGG  CCUCUU   GCU CUCGGGUAGUA UAAG             C
GGAAGUACCACACCGCGGCGA^  A-      GUG   C           C    AAGAGUUUCUACU 
  130       120       110        100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Mature sequence

Dno-Mir-433_5p

mirBase accessionMIMAT0047890
Sequence
0- UACGGUGAGCCUGUCAUUAUUC -22
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Co-mature sequence

Dno-Mir-433_3p

mirBase accessionMIMAT0047891
Sequence
52- AUCAUGAUGGGCUCCUCGGUGU -74
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