MirGeneDB 3.0

MirGeneDB ID

Mmr-Mir-433

Family name MIR-433 (all species)
Seed UCAUGAU
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-433  Cfa-Mir-433  Cja-Mir-433  Cpo-Mir-433  Dno-Mir-433  Eca-Mir-433  Ete-Mir-433  Hsa-Mir-433  Laf-Mir-433  Mml-Mir-433  Mmu-Mir-433  Ocu-Mir-433  Pab-Mir-433  Rno-Mir-433 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)
CM007663.1: 12584521-12584594 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-433)
Mir-136-v1 CM007663.1: 12587343-12587398 [+] UCSC Ensembl
Mir-136-v2 CM007663.1: 12587343-12587398 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAAGAAGACAACCCAAUGCCCGGGGAGAAGUACGGUGAGCCUGUCAUUAUUCAGAGAGGCAAGAUCCUCUAUGUUGAGAAGGAUCAUGAUGGGCUCCUCGGUGUUCUCCAGGUAGCGGCACCACACCUUGAAGG
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Structure
        10           20        30        40        50        60      
GAAGAAGACAACCCAAU-  --| GG      GUA   U           U    AGAGAGGCAAGAU 
                  GC  CC  GGAGAA   CGG GAGCCUGUCAU AUUC             C
                  CG  GG  CCUCUU   GCU CUCGGGUAGUA UAGG             C
GGAAGUUCCACACCACGG  AU^ A-      GUG   C           C    AAGAGUUGUAUCU 
  130       120       110        100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Mu Mu Mu Mu Mu Mu Mu Mu
Star sequence

Mmr-Mir-433_5p*

mirBase accessionNone
Sequence
0- UACGGUGAGCCUGUCAUUAUUC -22
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Mature sequence

Mmr-Mir-433_3p

mirBase accessionNone
Sequence
52- AUCAUGAUGGGCUCCUCGGUGU -74
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